Items where Research Area is "Bioinformatics and Computational Biology" and Year is 2021

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Number of items: 20.

Journal Paper

  • ModelRevelator: Fast phylogenetic model estimation via deep learning
    Burgstaller-Muehlbacher, Sebastian and Crotty, Stephen and Schmidt, Heiko A. and Drucks, Tamara and von Haeseler, Arndt ISSN 2692-8205 Cold Spring Harbor Laboratory (2021)

  • Gene expression profiling of Pseudomonas aeruginosa upon exposure to colistin and tobramycin
    Cianciulli Sesso, Anastasia and Lilic, Branislav and Amman, Fabian and Wolfinger, Michael T. and Sonnleitner, Elisabeth and Bläsi, Udo p. 626715 ISSN 1664-302X FRONTIERS MEDIA SA (2021)

  • RNAxplorer: harnessing the power of guiding potentials to sample RNA landscapes
    Entzian, Gregor and Hofacker, Ivo L. and Ponty, Yann and Lorenz, Ronny and Tanzer, Andrea Bioinformatics, 37. pp. 2126-2133 ISSN 1367-4803 (2021)

  • Culture-Free Detection of Antibiotic Resistance Markers from Native Patient Samples by Hybridization Capture Sequencing
    Ferreira, Ines and Lepuschitz, Sarah and Beisken, Stephan and Fiume, Giuseppe and Mrazek, Katharina and Frank, Bernhard J. H. and Huber, Silke and Knoll, Miriam A. and von Haeseler, Arndt and Materna, Arne and Hofstaetter, Jochen G. and Posch, Andreas E. and Weinberger, Johannes ISSN 20762607 MDPI (Multidisciplinary Digital Publishing Institute) (2021)

  • TMT-Opsins differentially modulate medaka brain function in a context-dependent manner
    Fontinha, Bruno M. and Zekoll, Theresa and Al-Rawi, Mariam and Gallach, Miguel and Reithofer, Florian and Barker, Alison J. and Hofbauer, Maximilian and Fischer, Ruth M. and von Haeseler, Arndt and Baier, Herwig and Tessmar-Raible, Kristin ISSN 1544-9173 Public Library of Science (2021)

  • NMD is required for timely cell fate transitions by fine-tuning gene expression and controlling translation
    Galimberti, Elena and Sehlke, Robert and Huth, Michelle and Garmhausen, Michelle and Romeike, Merrit and Ramesmayer, Julia and Stummer, Sarah and Titz-Teixeira, Fabian and Herzog, Veronika A. and Chugunova, Anastasia and Leesch, Katrin Friederike and Holcik, Laurenz and Bücker, Christa and Pauli, Andrea and Schoefer, Christian and Ameres, Stefan L. and Smith, Austin and Beyer, Andreas and Leeb, Martin and Weipoltshammer5, Klara and von Haeseler, Arndt and Santini, Laura and Lackner, Andreas ISSN none bioRxiv (2021)

  • An African tick flavivirus forming an independent clade exhibits unique exoribonuclease-resistant RNA structures in the genomic 3'-untranslated region
    Harima, Hayato and Orba, Yasuko and Torii, Shiho and Qiu, Yongjin and Kajihara, Masahiro and Eto, Yoshiki and Matsuta, Naoya and Hang'ombe, Bernard M. and Eshita, Yuki and Uemura, Kentaro and Matsuno, Keita and Sasaki, Michihito and Yoshii, Kentaro and Nakao, Ryo and Hall, William W. and Takada, Ayato and Abe, Takashi and Wolfinger, Michael T. and Simmunza, Martin and Sawa, Hirofumi Sci. Rep., 11. p. 4883 ISSN 2045-2322 Nature (2021)

  • Want to track pandemic variants faster? Fix the bioinformatics bottleneck
    Hodcroft, Emma B. and De Maio, Nicola and Lanfear, Robert and MacCannell, Duncan R. and Minh, Bui Quang and Schmidt, Heiko A. and Stamatakis, Alexandros and Goldman, Nick and Dessimoz, Christophe pp. 30-33 ISSN 0028-0836 Springer Nature (2021)

  • Timing strains of the marine insect Clunio marinus diverged and persist with gene flow
    Kaiser, Tobias and von Haeseler, Arndt and Tessmar-Raible, Kristin and Heckel, David G. pp. 1264-1280 ISSN 0962-1083 John Wiley & Sons Ltd (2021)

  • ATM controls meiotic DNA double-strand break formation and recombination and affects synaptonemal complex organization in plants
    Kurzbauer, Marie-Therese and Janisiw, Michael Peter and Paulin Paz, Luis and Mota, Ignacio Prusén and Tomanov, Konstantin and Krsicka, Ondrej and von Haeseler, Arndt and Schubert, Veit and Schlögelhofer, Peter pp. 1633-1656 ISSN 1040-4651 Oxford Academic Journals (2021)

  • Predictive Antibiotic Susceptibility Testing by Next-Generation Sequencing for Periprosthetic Joint Infections: Potential and Limitations
    Lüftinger, Lukas and Ferreira, Ines and Frank, Bernhard J. H. and Beisken, Stephan and Weinberger, Johannes and von Haeseler, Arndt and Rattei, Thomas and Hofstaetter, Jochen G. and Posch, Andreas E. and Materna, Arne ISSN ISSN 2227-9059 MDPI (Multidisciplinary Digital Publishing Institute) (2021)

  • Integrative transcriptomics reveals genotypic impact on sugar beet storability
    Madritsch, Silvia and Bomers, Svenja and Posekany, Alexandra and Burg, Agnes and Birke, Rebekka and Emerstorfer, Florian and Turetschek, Reinhard and Otte, Sandra and Eigner, Herbert and Otte, Sandra and Sehr, Eva M. pp. 359-378 ISSN 0167-4412 Springer Nature (2021)

  • Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
    Mavian, Carla and Kosakovsky Pond, Sergei and Marini, Simone and Rife Magalis, Brittany and Vandamme, Anne-Miek and Delicour, Simon and Scarpino, Samuel V. and Houldcroft, Charlotte and Vallbona-Arenas, Julian and Paisie, Taylor K. and Trovão, Nídia S. and Boucher, Christina and Zhang, Yun and Scheuermann, Richard H. and Gascuel, Olivier and Lam, Tommy Tsan-Yuk and Suchard, Marc A. and Abecasis, Ana and Wilkinson, Eduan and de Oliveira, Tulio and Bento, Ana I. and Schmidt, Heiko A. and Martin, Darren and Hadfield, James and Faria, Nuno and Grubaugh, Nathan D. and Neher, Richard A. and Baele, Guy and Lemey, Philippe and Stadler, Tanja and Albert, Jan and Crandall, Keith A. and Leitner, Thomas and Stamatakis, Alexandros and Prosperi, Mattia and Salemi, Marco pp. 12522-12523 ISSN 0027-8424 National Academy of Sciences (2021)

  • A-to-I RNA Editing Uncovers Hidden Signals of Adaptive Genome Evolution in Animals
    Popitsch, Niko and Huber, Christian D. and Buchumenski, Ilana and Eisenberg, Eli and Jantsch, Michael F. and von Haeseler, Arndt and Gallach, Miguel pp. 345-357 ISSN 1759-6653 Oxford University Press (2021)

  • A compendium of genome-wide sequence reads from NBS (nucleotide binding site) domains of resistance genes in the common potato
    Prakash, Celine and Trognitz, Friederike Ch. and Venhuizen, Peter and von Haeseler, Arndt and Trognitz, Bodo ISSN 2045-2322 Springer Nature (2021)

  • Characterization of cephalic and non-cephalic sensory cell types provides insight into joint photo- and mechanoreceptor evolution
    Revilla-i-Domingo,, Roger and Veedin Rajan, Vinoth Babu and Waldherr, Monika and Prohaczka, Günther and Musset, Hugo and Orel, Lukas and Gerrard, Elliot and Smolka, Moritz and Stockinger, Alexander and Tessmar-Raible, Kristin and Raible, Florian ISSN 2050-084X eLife Sciences Publications Ltd (2021)

  • Sequencing of the Arabidopsis NOR2 reveals its distinct organization and tissue-specific rRNA ribosomal variants
    Sims, Jason and Sestini, Giovanni and Elgert, Christiane and von Haeseler, Arndt and Schlögelhofer, Peter ISSN 2041-1723 Springer Nature Limited (2021)

  • Dynamic Molecular Epidemiology Reveals Lineage-Associated Single-Nucleotide Variants That Alter RNA Structure in Chikungunya Virus
    Spicher, Thomas and Delitz, Markus and de Bernardi Schneider, Adriano and Wolfinger, Michael T. p. 239 ISSN 2073-4425 MDPI (2021)

  • Enhancing the Cell-Free Expression of Native Membrane Proteins by In Silico Optimization of the Coding Sequence — An Experimental Study of the Human Voltage-Dependent Anion Channel
    Zayni, Sonja and Damiati, Samar and Moreno-Flores, Susana and Amman, Fabian and Hofacker, Ivo L. and Jin, David and Ehmoser, Eva-Kathrin Membranes, 11. p. 741 ISSN 2077-0375 mdpi (2021)

    • Book Section/Chapter

  • Functional RNA Structures in the 3'UTR of Mosquito-Borne Flaviviruses
    Wolfinger, Michael T. and Ochsenreiter, Roman and Hofacker, Ivo L. In: Virus Bioinformatics. Chapman and Hall/CRC Press, Boca Raton, pp. 65-100 ISBN 9781003097679 (2021)

    • This list was generated on Wed Nov 13 00:01:39 2024 CET.
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