Items where Research Area is "Bioinformatics and Computational Biology" and Year is 2014

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Number of items: 17.

Journal Paper

  • TSSAR: TSS Annotation Regime for dRNA-seq data
    Amman, Fabian and Wolfinger, Michael T and Lorenz, Ronny and Hofacker, Ivo L. and Stadler, Peter F and Findeiß, Sven BMC Bioinformatics, 15. p. 89 ISSN 1471-2105 (2014)

  • Bioinformatics of prokaryotic RNAs
    Backofen, Rolf and Amman, Fabian and Costa, Fabrizio and Findeiß, Sven and Richter, Andreas S. and Stadler, Peter F. RNA Biol, 11 (5). pp. 470-483 ISSN 1547-6286 (2014)

  • Impact of Hfq on the Bacillus subtilis transcriptome
    Hämmerle, Hermann and Amman, Fabian and Vecerek, Branislav and Stülke, Jörg and Bläsi, Udo PLoS One, 9. e98661 ISSN 1932-6203 (2014)

  • Basin Hopping Graph: A computational framework to characterize RNA folding landscapes
    Kucharik, Marcel and Hofacker, Ivo L. and Stadler, Peter F. and Qin, Jing Bioinformatics, 30. pp. 2009-2017 ISSN 1367-4803 (2014)

  • Challenges in RNA Virus Bioinformatics
    Marz, Manja and Beerenwinkel, Niko and Drosten, Christian and Fricke, Markus and Frishman, Dmitrij and Hofacker, Ivo L. and Hoffmann, Dieter and Middendorf, Martin and Rattei, Thomas and Stadler, Peter F. and Töpfer, Armin Bioinformatics, 30. pp. 1793-1799 ISSN 1367-4803 (2014)

  • Discovery of the first light-dependent protochlorophyllide oxidoreductase in anoxygenic phototrophic bacteria
    von Haeseler, Arndt and Bui, Minh Q. pp. 1066-1078 ISSN 0950-382X (2014)

  • The Phylogenetic Likelihood Library
    von Haeseler, Arndt and Bui, Minh Q. and Nguyen, Lam Tung pp. 356-362 ISSN 1076-836X Oxford University Press on behalf of the Society for Molecular Biology and Evolution. (2014)

  • Exploring phylogenomic data
    von Haeseler, Arndt and Ebersberger, Ingo 595-618 ISSN 9783110277524 DE GRUYTER (2014)

  • SNP2GO: Functional Analysis of Genome-Wide Association Studies
    von Haeseler, Arndt and Gallach, Miguel and Szkiba, David pp. 285-289 ISSN 1943-2631 Genetics (2014)

  • The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
    von Haeseler, Arndt and Kaiser, Tobias e1002005 ISSN e1002005 PUBLIC LIBRARY SCIENCE (2014)

  • A SAGE based approach to human glomerular endothelium: defining the transcriptome, finding a novel molecule and highlighting endothelial diversit
    von Haeseler, Arndt and Kupczok, Anne ISSN 1471-2164 BMC Genomics (2014)

  • IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
    von Haeseler, Arndt and Schmidt, Heiko A. and Bui, Minh Q. and Nguyen, Lam Tung pp. 268-274 ISSN 0737-4038 Oxford Journals (2014)

  • ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain
    von Haeseler, Arndt and Sedlazeck, Fritz and Tauber, Stefanie ISSN 0305-1048 Oxford University Press on behalf of Nucleic Acids Research (2014)

    • Paper in Conference Proceedings or in Workshop Proceedings

  • Computational design of a circular RNA with prion-like behavior
    Badelt, Stefan and Flamm, Christoph and Hofacker, Ivo L. In: Artificial Life 14 , 30.7.2014 - 2.8.2014 , New York, USA (2014)

    • Book Section/Chapter

  • Concepts and introduction to RNA bioinformatics
    Gorodkin, Jan and Ruzzo, Larry and Hofacker, Ivo L. In: RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods. Meth. Mol. Biol., 1097 Humana Press, New York, pp. 1-31 (2014)

  • Energy Directed RNA Structure Prediction
    Hofacker, Ivo L. In: RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods. Meth. Mol. Biol., 1097 Humana Press, New York, pp. 71-84 (2014)

  • Predicting RNA Structure: Advances and Limitations
    Hofacker, Ivo L. and Lorenz, Ronny In: RNA Folding. Meth. Mol. Biol., 1086 Humana Press, pp. 1-19 (2014)

    • This list was generated on Wed Nov 13 00:01:15 2024 CET.
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